BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E02LP1|AL425700
(737 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1674 1452 0.0
>3x_Contig1674
Length = 12281
Score = 1452 bits (730), Expect = 0.0
Identities = 733/736 (99%)
Strand = Plus / Plus
Query: 1 gatcgtggccatcttacccttcacagcgatggctactaaatttgtcgaatactctaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3052 gatcgtggccatcttacccttcacagcgatggctactaaatttgtcgaatactctaaatc 3111
Query: 61 cttgagcgatgacaactacaagtwgcatggtgtcagtcttcatttcattaactcttggaa 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3112 cttgagcgatgacaactacaagttgcatggtgtcagtcttcatttcattaactcttggaa 3171
Query: 121 acccgatttcaagaaaactgtattaccatacttgcaagaaaacaaccttgccgtatacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3172 acccgatttcaagaaaactgtattaccatacttgcaagaaaacaaccttgccgtatacct 3231
Query: 181 ttggaccgtcaattccgaaattgacatcaaatatatcagtagtatgaccattaccgggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3232 ttggaccgtcaattccgaaattgacatcaaatatatcagtagtatgaccattaccgggat 3291
Query: 241 tatcgttgatgatccggtagcttcagtgtcaattcgagatgagtacattcggaaagcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3292 tatcgttgatgatccggtagcttcagtgtcaattcgagatgagtacattcggaaagcagt 3351
Query: 301 gccgtttgtaccgccaattttcaatagctctgaaggttttagactataccttagacttcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3352 gccgtttgtaccgccaattttcaatagctctgaaggttttagactataccttagacttcg 3411
Query: 361 ggtattcgaagtggctgaaaggatccttagctcaagatgggccactgtcccagtattcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3412 ggtattcgaagtggctgaaaggatccttagctcaagatgggccactgtcccagtattcca 3471
Query: 421 tgatatcaccttgttgaaagtaaccgttttattgttaagaagaatccacttcatttaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3472 tgatatcaccttgttgaaagtaaccgttttattgttaagaagaatccacttcatttaaat 3531
Query: 481 gtcatttcatttcgtagacaatctatataacacacataccataggaagttaatatcctga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3532 gtcatttcatttcgtagacaatctatataacacacataccataggaagttaatatcctga 3591
Query: 541 aatatgttatatttagcttgcaattcgattatcgacggaccaattggtgtgtgggggatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3592 aatatgttatatttagcttgcaattcgattatcgacggaccaattggtgtgtgggggatt 3651
Query: 601 gacacattccattaagtcatatcacgtgattgtwagawctttcaagtttccctttctgaa 660
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 3652 gacacattccattaagtcatatcacgtgattgtaagaactttcaagtttccctttctgaa 3711
Query: 661 agtcgacgatttcgacaggaataacataccgatggacagaaacatttcataagataatac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3712 agtcgacgatttcgacaggaataacataccgatggacagaaacatttcataagataatac 3771
Query: 721 atgaattcagatgctt 736
||||||||||||||||
Sbjct: 3772 atgaattcagatgctt 3787
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5292
Number of Sequences: 1807
Number of extensions: 5292
Number of successful extensions: 127
Number of sequences better than 1.0e-20: 1
length of query: 737
length of database: 10,358,551
effective HSP length: 16
effective length of query: 721
effective length of database: 10,329,639
effective search space: 7447669719
effective search space used: 7447669719
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)